PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00310.1.g00150.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family TCP
Protein Properties Length: 309aa    MW: 30744.9 Da    PI: 9.3393
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00310.1.g00150.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP128.66.2e-4062155294
                           TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssss 81 
                                   ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++  + s +ss
  Zmw_sc00310.1.g00150.1.am.mk  62 PPKRSSTKDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKTDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSS 142
                                   689******************************************************************999777777777 PP

                           TCP  82 asnsssgkaaksa 94 
                                   +s+ s++++ ++a
  Zmw_sc00310.1.g00150.1.am.mk 143 GSSFSAPAHLRAA 155
                                   7755555443333 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.1E-3867155IPR005333Transcription factor, TCP
PROSITE profilePS5136927.86168122IPR017887Transcription factor TCP subgroup
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0007623Biological Processcircadian rhythm
GO:0008283Biological Processcell proliferation
GO:0009735Biological Processresponse to cytokinin
GO:0010229Biological Processinflorescence development
GO:0010252Biological Processauxin homeostasis
GO:0031540Biological Processregulation of anthocyanin biosynthetic process
GO:0042023Biological ProcessDNA endoreduplication
GO:0048467Biological Processgynoecium development
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    Send to blast
MDVAGDGGGG RRPNFPLQLL EKKEEQPCSS SAAVGASAGG GNGNGSGAPC GPGGEVQVRK  60
TPPKRSSTKD RHTKVEGRGR RIRMPALCAA RVFQLTRELG HKTDGETIEW LLQQAEPAVI  120
AATGTGTIPA NFTSLNISLR SSGSSFSAPA HLRAALPSPS SAVRFGRADA WDRAGGTPSS  180
GGGSGGNGGG SGESIWTFPQ MSSVAAAAAM YRGNVPSGLH FMNFPAAPMA LLPGQQLGLG  240
PVGGGGGGGD GGGGEGHMGI LTALNAYRTQ TATDSAAAQQ GDGGGGGSGQ QQHGGGRGER  300
HESMSTSDS
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00224DAPTransfer from AT1G69690Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008646257.14e-85PREDICTED: transcription factor TCP14-like
SwissprotQ9C9L22e-56TCP15_ARATH; Transcription factor TCP15
TrEMBLB8AIH11e-116B8AIH1_ORYSI; Putative uncharacterized protein
STRINGBGIOSGA009049-PA1e-116(Oryza sativa Indica Group)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37443479